blackboard arepa

What is arepa made of?

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What is Blackboard Learn?

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What is Keiser University Blackboard Learn?

ARepA is an acronym for Automated Repository Acquisition, and is designed as a command-line tool to easily fetch ‘omics data from multiple heterogeneous repositories and process them in a standardized way. Daniela Börnigen*, Yo Sup Moon*, Gholamali Rahnavard, Levi Waldron, Lauren McIver, Afrah Shafquat, Eric Franzosa, Larissa Miropolsky ...

Can I run arepa on a laptop?

aRepas current menu serves for lunch and dinner but occasionally also for breakfast. At the moment the five core offerings La REINA, La ORIGINAL, El CARIBE, La VEGGIE and MiFRESA decorate our blackboard. Seasonal arepa specials will be added according to availability of fresh and local products.

ARepA

ARepA is an acronym for Automated Repository Acquisition, and is designed as a command-line tool to easily fetch ‘omics data from multiple heterogeneous repositories and process them in a standardized way.

Automated Repository Acquisition

ARepA is an acronym for Automated Repository Acquisition, and is designed as a command-line tool to easily fetch ‘omics data from multiple heterogeneous repositories and process them in a standardized way.

1. Build components necessary for submodules

For you to be able to fetch data from a certain repository, say Bacteriome, you will first need to tell ARepA to build certain components that are shared across all the repositories. This process only needs to be completed once per change in the taxonomy input.

2. Build an external submodule

An internal submodule is a submodule that is associated with a repository; this is where data handling for a specific repository is done (e.g. Bacteriome). An external submodule is one that performs significant tasks associated globally within ARepA.

3. Get data from Bacteriome

You should now be familiar with how you can launch a submodule. To get data from Bacteriome, simply (you guessed it) launch scons in the Bacteriome submodule

4. Get data from GEO

GEO is the most complex ARepA module, allowing for the construction of very flexible pipelines to download and process data. In particular, you can specify the names of GSE/GDS datasets without having to download the entirity of the datasets from that particular taxonomy (E. coli is the running example). Let's take a look at its configuration file

What are Arepas?

Arepas are cornmeal cakes that originated hundreds of years ago in a region that now makes up Colombia, Venezuela, and Panama. Traditionally, they were cooked on a pan called a budare. But they can also be grilled, baked, or fried.

How to Make Arepa Sandwiches

Once your arepas are made, start by roasting your plantains until golden brown and caramelized. We recommend using ripe, spotty, yellow plantains for best results. If plantains are a newer ingredient to you, you can learn more about them here.

Black Bean & Plantain Arepa Sandwiches

30-minute, 10-ingredient arepa sandwiches with roasted plantains, smoky black beans, guacamole, and habanero hot sauce! A tasty snack or satisfying vegan meal!